Wednesday, July 10, 2013

Expressed Sequence Tags


Expressed Sequence Tags (ESTs)

ESTs are short (200–500 nucleotides) DNA sequences that can be used to identify a gene that is being expressed in a cell at a particular time.The Procedure:
  • Isolate the messenger RNA (mRNA) from a particular tissue (e.g., liver)
  • Treat it with reverse transcriptase. Reverse transcriptase is a DNA polymerase that uses RNA as its template. Thus it is able to make genetic information flow in the reverse (RNA ->DNA) of its normal direction (DNA -> RNA).
  • This produces complementary DNA (cDNA). Note that cDNA differs from the normal gene in lacking the intron sequences.
  • Sequence 200–500 nucleotides at both the 5′ and 3′ ends of each cDNA.
  • Examine the database of the organism's genome to find a matching sequence.
  • That is the gene that was expressed.

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